References for workshop exercises

From Computational Cell Biology

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===Cell Cycle===
===Cell Cycle===
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Hunt and Murray, Cell Cycle
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Hunt and Murray, ''Cell Cycle''
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Sha W., et al. Hysteresis Drives Cell-Cycle Transitions in Xenopus Leavis Egg Extracts
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Sha W., et al. 2003. Hysteresis Drives Cell-Cycle Transitions in Xenopus Leavis Egg Extracts. PNAS 100: 975-980.
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Tyson J.J., Modeling the Cell Division Cycle
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Tyson J.J., 1991. Modeling the Cell Division Cycle. PNAS 88: 7328-7332.
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Goldbeter A., A Minimal Cascade Model for the Mitotic Oscillator
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Goldbeter A., 1991. A Minimal Cascade Model for the Mitotic Oscillator. PNAS 88: 9107-9111.
===Virtual Cell Tutorials===
===Virtual Cell Tutorials===
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[http://www.vcell.org/login/frap.pdf Fluorescent Recovery After Photobleaching]
+
All Virtual Cell Tutorials can be found at the [http://vcell.org/login/login.html software download site] or [http://vcell.org/login/model_vcell.html "How to Model"] page.
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[http://www.vcell.org/login/facil_ca_dif.pdf Faciliated Diffusion]
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---[http://vcell.org/userdocs/Rel/Tutorial_SimpleFRAP.pdf Fluorescent Recovery After Photobleaching]
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[http://www.vcell.org/login/membrane_potential.pdf Membrane Potential]
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---[http://vcell.org/userdocs/Rel/Tutorial_FacilitatedCalciumDiffusion.pdf Faciliated Calcium Diffusion]
 +
 
 +
---[http://vcell.org/userdocs/Rel/Tutorial_FacilitatedCalciumDiffusion.pdf Membrane Potential]
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The links for tutorials have been updated to point to the most up to date version.
===Virtual Cell Software Guides===
===Virtual Cell Software Guides===
[http://www.vcell.org/login/VCell%20Quick%20Start%20Guide.pdf Quick tips]
[http://www.vcell.org/login/VCell%20Quick%20Start%20Guide.pdf Quick tips]
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[http://www.vcell.org/login/user_guide_4_1.pdf User Guide 4.1]
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[http://vcell.org/userdocs/Rel/VCellQuickStartGuide.pdf User Guide for Current Release Version of VCell]

Latest revision as of 15:40, 20 December 2007

Cell Cycle

Hunt and Murray, Cell Cycle

Sha W., et al. 2003. Hysteresis Drives Cell-Cycle Transitions in Xenopus Leavis Egg Extracts. PNAS 100: 975-980.

Tyson J.J., 1991. Modeling the Cell Division Cycle. PNAS 88: 7328-7332.

Goldbeter A., 1991. A Minimal Cascade Model for the Mitotic Oscillator. PNAS 88: 9107-9111.

Virtual Cell Tutorials

All Virtual Cell Tutorials can be found at the software download site or "How to Model" page.

---Fluorescent Recovery After Photobleaching

---Faciliated Calcium Diffusion

---Membrane Potential

The links for tutorials have been updated to point to the most up to date version.

Virtual Cell Software Guides

Quick tips

User Guide for Current Release Version of VCell

Personal tools